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General Information
| Manuscript title | An extended dynamic model of Lactococcus lactis metabolism for mannitol and 2,3-butanediol production |
| PubMed ID | 24413179 |
| Journal | Molecular BioSystems |
| Year | 2014 |
| Authors | Rafael S. Costa, Andras Hartmann, Paula Gaspar, Ana R. Neves and Susana Vinga |
| Affiliations | Instituto de Engenharia de Sistemas e Computadores, Investigacão e Desenvolvimento (INESC-ID), R Alves Redol 9, 1000-029 Lisboa, Portugal. |
| Keywords | L. lactis, extended model, mannitol and 2,3-butanediol production, control analysis |
| Full text article |
Costa_2014.pdf
|
| Project name | PneumoSyS |
| Data used for | Model building and Model validation |
Model Information
| Model name | glycolysis Lactococcus lactis for mannitol and 2,3-butanediol production |
| Organism | Lactococcus lactis |
| Model type | ordinary differential equations |
| Category | Metabolism |
| Number of reactions | 21 |
| Number of species | 26 |
| Number of regulators | 7 inhibitors and 3 activators |
| Number of parameters | 112 |
| Number of compartments | 2 |
| Dilution rate (h-1) | — |
| Model file(s) and history |
LATEST KIMOMODEL35.cps
(2014-07-21 10:18:41 UTC
by Rafael CostaFirst name: RafaelAffiliation: INESC-ID Homepage: https://fenix.tecnico.ulisboa.pt/homepage/ist90911 Interests: cellular metabolism, mathematical modeling, kinetic models, FBA, Metabolic Engineering ) |
| Notes |
Copasi model file used to produce manuscript figures.
|
| Software | http://www.copasi.org (COPASI) |
| BioModels or JWS Online ID | — |
| Export metadata |
RDF:
metadataModelEntryID35.rdf
XML: metadataModelEntryID35.xml Plain text: metadataModelEntryID35.txt |
Related Model(s): AccessID 23 | AccessID 24 | AccessID 37
Submission and curation
Entered by:
Rafael CostaFirst name: Rafael
Affiliation: INESC-ID
Homepage: https://fenix.tecnico.ulisboa.pt/homepage/ist90911
Interests: cellular metabolism, mathematical modeling, kinetic models, FBA, Metabolic Engineering
Created: 2014-07-21 10:15:55 UTC
Updated: 2014-07-30 13:00:58 UTC
Version: 1
Status: (reviewed) 2014-07-21 10:29:20 UTC
Views: 222
Downloads: 74