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General Information
Manuscript title Large-scale 13C-flux analysis reveals mechanistic principles of metabolic network robustness to null mutations in yeast.
PubMed ID 15960801
Journal BMC Genome Biology
Year 2005
Authors Lars M Blank, Lars Kuepfer and Uwe Sauer
Affiliations Institute of Biotechnology, ETH Zürich, 8093 Zürich, Switzerland
Keywords Pentose Phosphate Pathway, Flux Analysis, Glucose Uptake Rate, Oxidative Pentose Phosphate Pathway
Full text article Blank_2005.pdf
Project name not specified


Experiment Description
Organism Saccharomyces cerevisiae
Strain CEN.PK113-7D and 38 mutants
Data type flux measurements
Data units mmol/gh
Execution date not specified


Experimental Details
Temperature (°C) 30
pH 5
Carbon source glucose
Culture mode batch
Process condition aerobic
Dilution rate (h⁻¹)
Working volume (L) 0.0012
Biomass concentration (g/L) see worksheet
Medium composition

not specified

General protocol information Flux analysis method: 13C constrained MFA

Platform: GC-MS

Methods description - Notes

Glucose, acetate, ethanol and glycerol concentrations in the supernatant were determined with commercial enzymatic kits (Scil Diagnostics, Germany). Organic acids were quantified by high-pressure liquid chromatography (HPLC) using a Supelcogel C8 (4.6 by 250 mm) ion-exclusio ...

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Submission and curation

Entered by: Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data

Created: 2018-09-25 13:20:17 UTC

Updated: 2020-04-24 16:10:37 UTC

Version: 2

Status: (reviewed) 2018-09-25 13:23:27 UTC

Views: 192

Downloads: 48




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